PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_08213.1_g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 419aa    MW: 46284.7 Da    PI: 6.8914
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_08213.1_g00001.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.49.6e-11167195533
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                              k  rr+++NReAAr+sR+RKka++++Le 
  Rsa1.0_08213.1_g00001.1 167 KTLRRLAQNREAARKSRLRKKAYVQQLES 195
                              7789***********************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.3E-9158211No hitNo description
SMARTSM003385.5E-6163263IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.737165209IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.77E-7167208No hitNo description
CDDcd147081.27E-23167219No hitNo description
PfamPF001708.5E-8167197IPR004827Basic-leucine zipper domain
PROSITE patternPS000360170185IPR004827Basic-leucine zipper domain
PfamPF141441.3E-27258334IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    Send to blast
SSKDFNHHHH QMQGHHQNHH QQLSSASTTS SNGNFMNKDG YDLGEIDPSL FLYLDGQGHH  60
DPPSTAPLSH HHTTQNLAMR PPTSTLNIFP SQPMHIEPPP SSSTPNSDNT RLVAPSSSTR  120
PSSEPSMDLT NHSQFQLPQP SKSIKKEGNR KGPASSDHDI PKSSDPKTLR RLAQNREAAR  180
KSRLRKKAYV QQLESCRIKL TQLEQEIQRA RSQGVFFGGS LIGGDQQQGG LSIGPGNTSS  240
AVFDMEYTRW LEEQQRLLAE LRVATQENLT ENELRMFVDT CLAHYDHLIN LKAMVAKTDV  300
FHLISGAWKT PAERCFLWLG GGGFRPSEII KVIVNQIEQL TEQQIVGICG LQQSTQEAEE  360
ALSQGLDALN QSLSDSIVSD SLSPASAQFP PHLSNFMSHM SLALNKLSAL EGFVLQVGV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ1327420.0HQ132742.1 Arabidopsis thaliana bZIP65 (At5g06839) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009130967.10.0PREDICTED: transcription factor TGA2-like isoform X2
SwissprotQ415586e-93HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A0D3B0210.0A0A0D3B021_BRAOL; Uncharacterized protein
STRINGBra005914.1-P0.0(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM72072843
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.30.0bZIP family protein